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    D6PKL2 D6 protein kinase like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834826, updated on 18-Sep-2024

    Summary

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    Official Symbol
    D6PKL2
    Official Full Name
    D6 protein kinase like 2
    Primary source
    TAIR:AT5G47750
    Locus tag
    AT5G47750
    See related
    Araport:AT5G47750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    D6 protein kinase like 2; MCA23.7; MCA23_7; PK5
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    Genomic context

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    See D6PKL2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (19339703..19342410, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Thiolase family protein Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene ncRNA Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene 2-phosphoglycolate phosphatase 2 Neighboring gene farnesyl diphosphate synthase 1 Neighboring gene galacturonosyltransferase 4 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Roles of AGCVIII Kinases in the Hypocotyl Phototropism of Arabidopsis Seedlings. Haga K, et al. Plant Cell Physiol, 2018 May 1. PMID 29490064
    2. D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis. Willige BC, et al. Plant Cell, 2013 May. PMID 23709629, Free PMC Article
    3. Structural and functional insights into the regulation of Arabidopsis AGC VIIIa kinases. Zegzouti H, et al. J Biol Chem, 2006 Nov 17. PMID 16973627
    4. An IRE-like AGC kinase gene, MtIRE, has unique expression in the invasion zone of developing root nodules in Medicago truncatula. Pislariu CI, et al. Plant Physiol, 2007 Jun. PMID 17237187, Free PMC Article
    5. Growth signalling pathways in Arabidopsis and the AGC protein kinases. Bögre L, et al. Trends Plant Sci, 2003 Sep. PMID 13678909

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124149.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in basipetal auxin transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phototropism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein phosphorylation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in nucleolus HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    D6 protein kinase like 2
    NP_199586.1
    • D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19339703..19342410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124149.4 → NP_199586.1  D6 protein kinase like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199586.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39183, Q8W4K8
      UniProtKB/TrEMBL
      A0A5S9YC07, A0A654G9G9
      Conserved Domains (2) summary
      cd05574
      Location:189 → 551
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
      pfam13885
      Location:364 → 385
      Keratin_B2_2; Keratin, high sulfur B2 protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q39183.1

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