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    SNAP33 soluble N-ethylmaleimide-sensitive factor adaptor protein 33 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836242, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SNAP33
    Official Full Name
    soluble N-ethylmaleimide-sensitive factor adaptor protein 33
    Primary source
    TAIR:AT5G61210
    Locus tag
    AT5G61210
    See related
    Araport:AT5G61210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSNAP33; ATSNAP33B; MAF19.2; MAF19_2; SNP33; soluble N-ethylmaleimide-sensitive factor adaptor protein 33
    Summary
    membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
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    Genomic context

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    See SNAP33 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (24623248..24625631)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein Neighboring gene myosin heavy chain-like protein Neighboring gene ncRNA Neighboring gene LYR family of Fe/S cluster biogenesis protein Neighboring gene Ankyrin repeat family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene glucuronidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of CkSNAP33, a gene encoding synaptosomal-associated protein from Cynanchum komarovii, that enhances Arabidopsis resistance to Verticillium dahliae. Wang P, et al. PLoS One, 2017. PMID 28575006, Free PMC Article
    2. The expression of the t-SNARE AtSNAP33 is induced by pathogens and mechanical stimulation. Wick P, et al. Plant Physiol, 2003 May. PMID 12746539, Free PMC Article
    3. Activity determinants and functional specialization of Arabidopsis PEN1 syntaxin in innate immunity. Pajonk S, et al. J Biol Chem, 2008 Oct 3. PMID 18678865
    4. A truncated NLR protein, TIR-NBS2, is required for activated defense responses in the exo70B1 mutant. Zhao T, et al. PLoS Genet, 2015 Jan. PMID 25617755, Free PMC Article
    5. Arabidopsis Sec1/Munc18 protein SEC11 is a competitive and dynamic modulator of SNARE binding and SYP121-dependent vesicle traffic. Karnik R, et al. Plant Cell, 2013 Apr. PMID 23572542, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Cynanchum komarovii SNAP33 contains Qb- and Qc-SNARE domains in the N- and C-terminal regions, respectively, and shares high sequence identity with SNAP33 from Arabidopsis.
      Title: Identification of CkSNAP33, a gene encoding synaptosomal-associated protein from Cynanchum komarovii, that enhances Arabidopsis resistance to Verticillium dahliae.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001345457.1
    NM_125514.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNAP receptor activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytokinesis by cell plate formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within membrane fusion TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to mechanical stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to other organism IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within vesicle-mediated transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell plate IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    soluble N-ethylmaleimide-sensitive factor adaptor protein 33
    NP_200929.1
    • soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24623248..24625631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125514.5 → NP_200929.1  soluble N-ethylmaleimide-sensitive factor adaptor protein 33 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200929.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7P9
      UniProtKB/TrEMBL
      A0A178UGR9, A0A5S9YG64, A0A7G2FLZ2
      Conserved Domains (2) summary
      cd15841
      Location:238 → 296
      SNARE_Qc; SNARE motif, subgroup Qc
      cd15861
      Location:104 → 167
      SNARE_SNAP25N_23N_29N_SEC9N; N-terminal SNARE motif of SNAP25, SNAP23, SNAP29, and SEC9

    2. NM_001345457.1 → NP_001332102.1  soluble N-ethylmaleimide-sensitive factor adaptor protein 33 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7P9
      UniProtKB/TrEMBL
      A0A178UGR9, A0A5S9YG64, A0A7G2FLZ2
      Conserved Domains (2) summary
      cd15841
      Location:238 → 296
      SNARE_Qc; SNARE motif, subgroup Qc
      cd15861
      Location:104 → 167
      SNARE_SNAP25N_23N_29N_SEC9N; N-terminal SNARE motif of SNAP25, SNAP23, SNAP29, and SEC9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S7P9.1

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