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    zinc ion binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836232, updated on 18-Sep-2024

    Summary

    Official Full Name
    zinc ion binding protein
    Primary source
    TAIR:AT5G61110
    Locus tag
    AT5G61110
    See related
    Araport:AT5G61110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAF19.11; MAF19_11
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (24581078..24582130, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene zinc ion-binding protein Neighboring gene plasmodesmata callose-binding protein 1

    General gene information

    NM_125504.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables histone reader activity  
    enables protein binding PubMed 
    Component Evidence Code Pubs
    located_in nucleus  

    General protein information

    Preferred Names
    zinc ion binding protein
    NP_200919.2
    • zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61100.1); Has 78 Blast hits to 72 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24581078..24582130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125504.3 → NP_200919.2  zinc ion binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200919.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFQ9, Q9FNQ4
      UniProtKB/TrEMBL
      A0A178U8U4, A0A5S9YG55, A0A654GD10
      Conserved Domains (1) summary
      cl22851
      Location:33 → 77
      PHD_SF; PHD finger superfamily
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