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    CG12869 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36616, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12869provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033943
    Locus tag
    Dmel_CG12869
    See related
    AllianceGenome:FB:FBgn0033943
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12869
    Summary
    Is expressed in embryonic head sensory system; embryonic ventral epidermis; sense organ; sensory cluster; and ventral sensory complex primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12869 in Genome Data Viewer
    Location:
    51B4-51B4; 2-72 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14591203..14595617)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10478708..10483122)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene tout-velu Neighboring gene uncharacterized protein Neighboring gene Lamin C Neighboring gene small Cajal body-specific RNA : PsiU5-44 Neighboring gene RNA polymerase I subunit A Neighboring gene Biogenesis of lysosome-related organelles complex 1, subunit 1 Neighboring gene transformer 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Flanking genes of an essential gene give information about the evolution of metazoa. Zimek A, et al. Eur J Cell Biol, 2011 Apr. PMID 21163549
    2. Heterochromatin protein 2 (HP2), a partner of HP1 in Drosophila heterochromatin. Shaffer CD, et al. Proc Natl Acad Sci U S A, 2002 Oct 29. PMID 12376620, Free PMC Article
    3. The complex contributions of genetics and nutrition to immunity in Drosophila melanogaster. Unckless RL, et al. PLoS Genet, 2015 Mar. PMID 25764027, Free PMC Article
    4. Global analysis of patterns of gene expression during Drosophila embryogenesis. Tomancak P, et al. Genome Biol, 2007. PMID 17645804, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables peptidase activity IKR
    Inferred from Key Residues
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12869-PA
    CG12869-PB
    CG12869-PC
    CG12869-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14591203..14595617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137125.3 → NP_610969.1  uncharacterized protein Dmel_CG12869, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610969.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T016, Q9V731
      Related
      FBpp0086625
      Conserved Domains (2) summary
      COG0657
      Location:133 → 252
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:25 → 540
      COesterase; Carboxylesterase family

    2. NM_001299491.1 → NP_001286420.1  uncharacterized protein Dmel_CG12869, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286420.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T016, Q9V731
      Conserved Domains (2) summary
      COG0657
      Location:133 → 252
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:25 → 540
      COesterase; Carboxylesterase family

    3. NM_001382021.1 → NP_001369085.1  uncharacterized protein Dmel_CG12869, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A6M3QH83
      Conserved Domains (1) summary
      pfam00135
      Location:27 → 541
      COesterase; Carboxylesterase family

    4. NM_001299492.1 → NP_001286421.1  uncharacterized protein Dmel_CG12869, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286421.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T016, Q9V731
      Conserved Domains (2) summary
      COG0657
      Location:133 → 252
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:25 → 540
      COesterase; Carboxylesterase family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A6M3QH83 A0A6M3QH83
    Q8T016 Q8T016

    Gene LinkOut

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