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    hkb huckebein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40549, updated on 17-Dec-2024

    Summary

    Official Symbol
    hkbprovided by FlyBase
    Official Full Name
    huckebeinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261434
    Locus tag
    Dmel_CG9768
    See related
    AllianceGenome:FB:FBgn0261434
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    5953; anon-82B3; CG9768; Dmel\CG9768; gurt; Hkb; HKB
    Summary
    Enables sequence-specific DNA binding activity and transcription corepressor binding activity. Involved in several processes, including germ cell migration; negative regulation of transcription by RNA polymerase II; and nervous system development. Located in nucleus. Is expressed in several structures, including CNS glial cell; anlage in statu nascendi; embryonic procephalic segment; head epidermis primordium; and neuroblasts. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 1K and congenital dyserythropoietic anemia type IV. Orthologous to several human genes including KLF1 (KLF transcription factor 1); KLF14 (KLF transcription factor 14); and KLF16 (KLF transcription factor 16). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See hkb in Genome Data Viewer
    Location:
    82A4-82A4; 3-47.1 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4345015..4346646, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (170737..172368, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-phase kinase-associated protein 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44922

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in cell fate specification TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in central nervous system development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in ectoderm and mesoderm interaction NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in endoderm development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in endoderm formation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in germ cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in germ cell migration TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in glial cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in posterior midgut invagination NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in salivary gland development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in salivary gland morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in salivary gland morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in tube morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    huckebein
    Names
    CG9768-PA
    gurtelchen
    hkb-PA
    huckbein
    hucklebein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4345015..4346646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079497.4NP_524221.1  huckebein [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524221.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VN10
      Related
      FBpp0078591
      Conserved Domains (4) summary
      COG5048
      Location:195261
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:197217
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:195217
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:239264
      zf-H2C2_2; Zinc-finger double domain