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    yfiR hypothetical protein [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877671, updated on 11-Sep-2024

    Summary

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    Gene symbol
    yfiR
    Gene description
    hypothetical protein
    Locus tag
    PA1121
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1214502..1215074, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene diguanylate cyclase Neighboring gene pseudo Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1. Li S, et al. Sci Rep, 2015 Nov 23. PMID 26593397, Free PMC Article
    2. Crystal structures of YfiR from Pseudomonas aeruginosa in two redox states. Yang X, et al. Biochem Biophys Res Commun, 2015 May 22. PMID 25849887
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. YfiB is an outer membrane lipoprotein and presumed sensor protein that sequesters the repressor protein YfiR.
      Title: Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1.
    2. Mutagenesis studies indicated that Cys145-Cys152 plays an important role in maintaining the correct folding of YfiR.
      Title: Crystal structures of YfiR from Pseudomonas aeruginosa in two redox states.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hypothetical protein
    NP_249812.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1214502..1215074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249812.1 hypothetical protein PA1121 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249812.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3M5D3Q8
      Conserved Domains (1) summary
      pfam13689
      Location:48 → 185
      DUF4154; Domain of unknown function (DUF4154)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I4L4.1

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