U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gpr174 G protein-coupled receptor 174 [ Mus musculus (house mouse) ]

    Gene ID: 213439, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gpr174provided by MGI
    Official Full Name
    G protein-coupled receptor 174provided by MGI
    Primary source
    MGI:MGI:2685222
    See related
    Ensembl:ENSMUSG00000073008 AllianceGenome:MGI:2685222
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm376; Lypsr3
    Summary
    Enables bioactive lipid receptor activity. Acts upstream of or within T cell homeostasis. Predicted to be located in centriolar satellite and intracellular membrane-bounded organelle. Predicted to be active in plasma membrane. Orthologous to human GPR174 (G protein-coupled receptor 174). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gpr174 in Genome Data Viewer
    Location:
    X D; X 47.48 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (106299484..106340377)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (107255878..107296771)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11054 Neighboring gene STARR-positive B cell enhancer ABC_E11686 Neighboring gene purinergic receptor P2Y, G-protein coupled 10B Neighboring gene prohibitin pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chrX:104413022-104413322 Neighboring gene STARR-positive B cell enhancer ABC_E7704 Neighboring gene alpha-enolase pseudogene Neighboring gene STARR-seq mESC enhancer starr_47743 Neighboring gene glutamate dehydrogenase 1 pseudogene Neighboring gene ribosomal protein L7a pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables bioactive lipid receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in centriolar satellite IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IC
    Inferred by Curator
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    probable G-protein coupled receptor 174
    Names
    putative purinergic receptor FKSG79

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033251.5NP_001028423.1  probable G-protein coupled receptor 174

      See identical proteins and their annotated locations for NP_001028423.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
      Source sequence(s)
      AK153611, AL663081
      Consensus CDS
      CCDS30348.1
      UniProtKB/Swiss-Prot
      Q3U507
      Related
      ENSMUSP00000112974.2, ENSMUST00000120971.8
      Conserved Domains (1) summary
      cd15152
      Location:20303
      7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_001177781.1NP_001171252.1  probable G-protein coupled receptor 174

      See identical proteins and their annotated locations for NP_001171252.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
      Source sequence(s)
      AL663081
      Consensus CDS
      CCDS30348.1
      UniProtKB/Swiss-Prot
      Q3U507
      Related
      ENSMUSP00000098852.3, ENSMUST00000101294.9
      Conserved Domains (1) summary
      cd15152
      Location:20303
      7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. NM_001177782.1NP_001171253.1  probable G-protein coupled receptor 174

      See identical proteins and their annotated locations for NP_001171253.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
      Source sequence(s)
      AL663081, BQ562837
      Consensus CDS
      CCDS30348.1
      UniProtKB/Swiss-Prot
      Q3U507
      Related
      ENSMUSP00000137372.2, ENSMUST00000178838.2
      Conserved Domains (1) summary
      cd15152
      Location:20303
      7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
    4. NM_001358747.1NP_001345676.1  probable G-protein coupled receptor 174

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
      Source sequence(s)
      AL663081
      Consensus CDS
      CCDS30348.1
      UniProtKB/Swiss-Prot
      Q3U507
      Related
      ENSMUSP00000113032.2, ENSMUST00000118820.8
      Conserved Domains (1) summary
      cd15152
      Location:20303
      7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      106299484..106340377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017318457.2XP_017173946.1  probable G-protein coupled receptor 174 isoform X1

      Conserved Domains (1) summary
      cd15152
      Location:33316
      7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors