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    Phf21a PHD finger protein 21A [ Mus musculus (house mouse) ]

    Gene ID: 192285, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Phf21aprovided by MGI
    Official Full Name
    PHD finger protein 21Aprovided by MGI
    Primary source
    MGI:MGI:2384756
    See related
    Ensembl:ENSMUSG00000058318 AllianceGenome:MGI:2384756
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bhc; 80kDa; Bhc80; PFTF1; BHC80a; mBHC80; D030065N23Rik
    Summary
    Enables chromatin binding activity. Acts upstream of or within suckling behavior. Predicted to be part of DNA repair complex and histone deacetylase complex. Is expressed in several structures, including central nervous system; cranium; early conceptus; genitourinary system; and hemolymphoid system. Orthologous to human PHF21A (PHD finger protein 21A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 6.7), ovary adult (RPKM 5.9) and 28 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Phf21a in Genome Data Viewer
    Location:
    2 E1; 2 50.8 cM
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (92014096..92195011)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (92183751..92364667)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 31473 Neighboring gene STARR-seq mESC enhancer starr_05133 Neighboring gene predicted gene, 39877 Neighboring gene STARR-positive B cell enhancer ABC_E9520 Neighboring gene STARR-seq mESC enhancer starr_05137 Neighboring gene microRNA 1955 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene STARR-seq mESC enhancer starr_05138 Neighboring gene STARR-positive B cell enhancer ABC_E1247 Neighboring gene STARR-positive B cell enhancer ABC_E4480 Neighboring gene LARGE xylosyl- and glucuronyltransferase 2 Neighboring gene peroxisomal biogenesis factor 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A component of BRAF-HDAC complex, BHC80, is required for neonatal survival in mice. Iwase S, et al. FEBS Lett, 2006 May 29. PMID 16684532
    2. LSD1 regulates pluripotency of embryonic stem/carcinoma cells through histone deacetylase 1-mediated deacetylation of histone H4 at lysine 16. Yin F, et al. Mol Cell Biol, 2014 Jan. PMID 24190971, Free PMC Article
    3. Translocations disrupting PHF21A in the Potocki-Shaffer-syndrome region are associated with intellectual disability and craniofacial anomalies. Kim HG, et al. Am J Hum Genet, 2012 Jul 13. PMID 22770980, Free PMC Article
    4. Characterization of BHC80 in BRAF-HDAC complex, involved in neuron-specific gene repression. Iwase S, et al. Biochem Biophys Res Commun, 2004 Sep 17. PMID 15325272
    5. A SMAD1/5-YAP signalling module drives radial glia self-amplification and growth of the developing cerebral cortex. Najas S, et al. Development, 2020 Jul 13. PMID 32541003

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Presumably serves as a scaffold protein in BHC in neuronal as well as non-neuronal cells. Possible role in spermatogenesis.
      Title: Characterization of BHC80 in BRAF-HDAC complex, involved in neuron-specific gene repression.
    2. Bhc80 is indispensable for the survival of neonatal pups.
      Title: A component of BRAF-HDAC complex, BHC80, is required for neonatal survival in mice.
    Submit: New GeneRIF Correction

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC29190, MGC123676

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables chromatin binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
    		  
    acts_upstream_of_or_within suckling behavior IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DNA repair complex ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    part_of histone deacetylase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of histone deacetylase complex ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    PHD finger protein 21A
    Names
    BRAF35-HDAC complex protein BHC80
    BRAF35/HDAC2 complex
    Braf35/HDAC complex (Bhc)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109690.2 → NP_001103160.1  PHD finger protein 21A isoform 2

      See identical proteins and their annotated locations for NP_001103160.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) encodes the longest isoform (2).
      Source sequence(s)
      AL731709
      Consensus CDS
      CCDS50644.1
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Related
      ENSMUSP00000088074.6, ENSMUST00000090586.12
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    2. NM_001109691.1 → NP_001103161.1  PHD finger protein 21A isoform 3

      See identical proteins and their annotated locations for NP_001103161.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3), as well as variant 9, encodes isoform 3.
      Source sequence(s)
      AK037174, AL731709, BQ031869
      Consensus CDS
      CCDS50645.1
      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Related
      ENSMUSP00000106922.3, ENSMUST00000111291.9
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    3. NM_001346704.1 → NP_001333633.1  PHD finger protein 21A isoform 4

      Status: VALIDATED

      Source sequence(s)
      AL691462, AL731709
      Consensus CDS
      CCDS84556.1
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A2AHG4
      Related
      ENSMUSP00000106925.2, ENSMUST00000111294.8

    4. NM_001362829.1 → NP_001349758.1  PHD finger protein 21A isoform 5

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5), as well as variant 6, encodes isoform 5.
      Source sequence(s)
      AL691462, AL731709
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    5. NM_001362830.1 → NP_001349759.1  PHD finger protein 21A isoform 5

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6), as well as variant 5, encodes isoform 5.
      Source sequence(s)
      AL691462, AL731709
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    6. NM_001362831.1 → NP_001349760.1  PHD finger protein 21A isoform 6

      Status: VALIDATED

      Source sequence(s)
      AL691462, AL731709
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (2) summary
      cd15523
      Location:459 → 501
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      cl26267
      Location:349 → 505
      ING; Inhibitor of growth proteins N-terminal histone-binding

    7. NM_001362832.1 → NP_001349761.1  PHD finger protein 21A isoform 7

      Status: VALIDATED

      Source sequence(s)
      AL691462, AL731709
      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (2) summary
      COG5034
      Location:341 → 497
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:451 → 493
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    8. NM_001362833.1 → NP_001349762.1  PHD finger protein 21A isoform 3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (9), as well as variant 3, encodes isoform 3.
      Source sequence(s)
      AL691462, AL731709
      Consensus CDS
      CCDS50645.1
      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    9. NM_138755.2 → NP_620094.2  PHD finger protein 21A isoform 1

      Status: VALIDATED

      Source sequence(s)
      AB105178, AK037174, AL731709, BQ031869, CX217243
      Consensus CDS
      CCDS16442.1
      UniProtKB/TrEMBL
      A2AHG3, F6URE6
      Related
      ENSMUSP00000106923.2, ENSMUST00000111292.8
      Conserved Domains (2) summary
      COG5034
      Location:257 → 413
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:367 → 409
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      92014096..92195011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006498967.4 → XP_006499030.1  PHD finger protein 21A isoform X3

      See identical proteins and their annotated locations for XP_006499030.1

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Related
      ENSMUSP00000106924.3, ENSMUST00000111293.9
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    2. XM_030248695.2 → XP_030104555.1  PHD finger protein 21A isoform X6

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    3. XM_030248704.2 → XP_030104564.1  PHD finger protein 21A isoform X10

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (3) summary
      COG5034
      Location:340 → 496
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:450 → 492
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    4. XM_030248709.2 → XP_030104569.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    5. XM_030248688.2 → XP_030104548.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    6. XM_030248698.2 → XP_030104558.1  PHD finger protein 21A isoform X6

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    7. XM_030248707.2 → XP_030104567.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    8. XM_036159680.1 → XP_036015573.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    9. XM_011239373.4 → XP_011237675.1  PHD finger protein 21A isoform X2

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:505 → 547
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    10. XM_006498975.5 → XP_006499038.1  PHD finger protein 21A isoform X5

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    11. XM_006498980.5 → XP_006499043.1  PHD finger protein 21A isoform X11

      See identical proteins and their annotated locations for XP_006499043.1

      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    12. XM_006498971.5 → XP_006499034.1  PHD finger protein 21A isoform X3

      See identical proteins and their annotated locations for XP_006499034.1

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    13. XM_036159673.1 → XP_036015566.1  PHD finger protein 21A isoform X5

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    14. XM_030248691.2 → XP_030104551.1  PHD finger protein 21A isoform X4

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    15. XM_036159674.1 → XP_036015567.1  PHD finger protein 21A isoform X6

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    16. XM_030248708.2 → XP_030104568.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    17. XM_030248715.2 → XP_030104575.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Related
      ENSMUSP00000123955.2, ENSMUST00000159961.8
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    18. XM_030248703.2 → XP_030104563.1  PHD finger protein 21A isoform X8

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (2) summary
      COG5034
      Location:341 → 497
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:451 → 493
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    19. XM_017316533.3 → XP_017172022.1  PHD finger protein 21A isoform X7

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (2) summary
      COG5034
      Location:348 → 504
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:458 → 500
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    20. XM_017316543.3 → XP_017172032.1  PHD finger protein 21A isoform X9

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (3) summary
      COG5034
      Location:341 → 497
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:451 → 493
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    21. XM_017316548.3 → XP_017172037.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    22. XM_036159679.1 → XP_036015572.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    23. XM_036159677.1 → XP_036015570.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      D3Z764, F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:415 → 457
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    24. XM_036159681.1 → XP_036015574.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    25. XM_030248712.2 → XP_030104572.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (1) summary
      cd15523
      Location:414 → 456
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    26. XM_036159683.1 → XP_036015576.1  PHD finger protein 21A isoform X13

      UniProtKB/TrEMBL
      F6URE6
      Conserved Domains (2) summary
      COG5034
      Location:258 → 414
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:368 → 410
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    27. XM_036159685.1 → XP_036015578.1  PHD finger protein 21A isoform X14

      UniProtKB/TrEMBL
      A2AHG3, F6URE6
      Conserved Domains (2) summary
      COG5034
      Location:257 → 413
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:367 → 409
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    28. XM_011239364.3 → XP_011237666.1  PHD finger protein 21A isoform X1

      See identical proteins and their annotated locations for XP_011237666.1

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:506 → 548
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    29. XM_036159666.1 → XP_036015559.1  PHD finger protein 21A isoform X2

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:505 → 547
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    30. XM_011239362.3 → XP_011237664.1  PHD finger protein 21A isoform X1

      See identical proteins and their annotated locations for XP_011237664.1

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:506 → 548
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    31. XM_030248696.2 → XP_030104556.1  PHD finger protein 21A isoform X6

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    32. XM_017316527.3 → XP_017172016.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    33. XM_036159671.1 → XP_036015564.1  PHD finger protein 21A isoform X4

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    34. XM_030248682.2 → XP_030104542.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    35. XM_006498970.5 → XP_006499033.1  PHD finger protein 21A isoform X3

      See identical proteins and their annotated locations for XP_006499033.1

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    36. XM_036159672.1 → XP_036015565.1  PHD finger protein 21A isoform X4

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    37. XM_030248685.2 → XP_030104545.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    38. XM_036159669.1 → XP_036015562.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    39. XM_030248702.2 → XP_030104562.1  PHD finger protein 21A isoform X8

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (2) summary
      COG5034
      Location:341 → 497
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:451 → 493
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    40. XM_030248692.2 → XP_030104552.1  PHD finger protein 21A isoform X5

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    41. XM_030248693.2 → XP_030104553.1  PHD finger protein 21A isoform X5

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      Conserved Domains (1) summary
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    42. XM_036159670.1 → XP_036015563.1  PHD finger protein 21A isoform X3

      UniProtKB/Swiss-Prot
      A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
      UniProtKB/TrEMBL
      A0A498WGG5
      Conserved Domains (1) summary
      cd15523
      Location:499 → 541
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    RNA

    1. XR_004939029.1 RNA Sequence

    2. XR_004939031.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ZPK0.3 GenPept UniProtKB/Swiss-Prot:Q6ZPK0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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