U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gpr15lg G protein coupled receptor 15 ligand [ Mus musculus (house mouse) ]

    Gene ID: 70045, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gpr15lgprovided by MGI
    Official Full Name
    G protein coupled receptor 15 ligandprovided by MGI
    Primary source
    MGI:MGI:1917295
    See related
    Ensembl:ENSMUSG00000096001 AllianceGenome:MGI:1917295
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gpr15l; 2610528A11Rik
    Summary
    Enables chemokine activity. Involved in lymphocyte chemotaxis. Predicted to be located in extracellular region. Is expressed in tail unsegmented mesenchyme. Orthologous to human GPR15LG (G protein-coupled receptor 15 ligand). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in colon adult (RPKM 238.3) and testis adult (RPKM 26.0) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gpr15lg in Genome Data Viewer
    Location:
    14 B; 14 21.29 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (36824097..36832058, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (37102140..37110101, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 Neighboring gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 Neighboring gene cadherin-related family member 1 Neighboring gene growth hormone inducible transmembrane protein Neighboring gene STARR-positive B cell enhancer ABC_E751 Neighboring gene STARR-seq mESC enhancer starr_36423 Neighboring gene STARR-seq mESC enhancer starr_36424 Neighboring gene predicted gene, 18834

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables chemokine activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables chemokine activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables receptor ligand activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables receptor ligand activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in G protein-coupled receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in T cell homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in T cell homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in defense response to Gram-positive bacterium IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in defense response to Gram-positive bacterium ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in defense response to fungus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lymphocyte chemotaxis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lymphocyte chemotaxis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mast cell degranulation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mast cell degranulation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of cell cycle G1/S phase transition IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell cycle G1/S phase transition ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell division ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of T cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of T cell migration ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of keratinocyte proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of keratinocyte proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein GPR15LG
    Names
    protein GPR15 ligand
    protein GPR15L
    secreted protein C10orf99 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206684.1NP_001193613.1  protein GPR15LG precursor

      See identical proteins and their annotated locations for NP_001193613.1

      Status: VALIDATED

      Source sequence(s)
      AK012157, CT009495
      Consensus CDS
      CCDS56949.1
      UniProtKB/Swiss-Prot
      A0A0B4J1N3
      Related
      ENSMUSP00000136426.2, ENSMUST00000179488.3
      Conserved Domains (1) summary
      pfam15854
      Location:177
      DUF4725; Domain of unknown function (DUF4725)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      36824097..36832058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)