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    Trpd52l3 tumor protein D52-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 66745, updated on 27-Nov-2024

    Summary

    Official Symbol
    Trpd52l3provided by MGI
    Official Full Name
    tumor protein D52-like 3provided by MGI
    Primary source
    MGI:MGI:1913995
    See related
    Ensembl:ENSMUSG00000024815 AllianceGenome:MGI:1913995
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4931412G03Rik
    Summary
    Predicted to be active in cytoplasm. Orthologous to human TPD52L3 (TPD52 like 3). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Trpd52l3 in Genome Data Viewer
    Location:
    19 C1; 19 24.68 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (29981190..29983420)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (30003790..30006020)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41832 Neighboring gene STARR-seq mESC enhancer starr_45899 Neighboring gene interleukin 33 Neighboring gene STARR-seq mESC enhancer starr_45900 Neighboring gene predicted gene, 26046 Neighboring gene ubiquitin-like, containing PHD and RING finger domains 2 Neighboring gene glycine decarboxylase Neighboring gene ribosomal protein L31, pseudogene 20

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025741.2NP_080017.1  tumor protein D55

      See identical proteins and their annotated locations for NP_080017.1

      Status: VALIDATED

      Source sequence(s)
      AK016450, AV265273, BB572869, BC125316
      Consensus CDS
      CCDS29741.1
      UniProtKB/TrEMBL
      Q9CQ14
      Related
      ENSMUSP00000025727.5, ENSMUST00000025727.6
      Conserved Domains (1) summary
      pfam04201
      Location:58205
      TPD52; Tumour protein D52 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      29981190..29983420
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)