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    Ccdc9b coiled-coil domain containing 9B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 311323, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ccdc9bprovided by RGD
    Official Full Name
    coiled-coil domain containing 9Bprovided by RGD
    Primary source
    RGD:1565536
    See related
    EnsemblRapid:ENSRNOG00000028910 AllianceGenome:RGD:1565536
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565536
    Summary
    Orthologous to human CCDC9B (coiled-coil domain containing 9B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 262.3), Lung (RPKM 187.2) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Ccdc9b in Genome Data Viewer
    Location:
    3q35
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (126190039..126198931, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (105736120..105745039, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (110548238..110557096, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102548045 Neighboring gene InaF motif containing 2 Neighboring gene proline, histidine and glycine rich 1 Neighboring gene dispatched RND transporter family member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Castello A, et al. Cell, 2012 Jun 8. PMID 22658674

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 9B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      126190039..126198931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056985389.2 → XP_056841369.1  coiled-coil domain-containing protein 9B isoform X5

    2. XM_063285305.1 → XP_063141375.1  coiled-coil domain-containing protein 9B isoform X3

      UniProtKB/TrEMBL
      A0A8I5ZNP2

    3. XM_056985387.2 → XP_056841367.1  coiled-coil domain-containing protein 9B isoform X1

      UniProtKB/TrEMBL
      A0A8I5ZNP2
      Related
      ENSRNOP00000070443.3, ENSRNOT00000092158.3

    4. XM_056985388.2 → XP_056841368.1  coiled-coil domain-containing protein 9B isoform X2

      UniProtKB/TrEMBL
      A0A8I5ZNP2

    5. XM_063285306.1 → XP_063141376.1  coiled-coil domain-containing protein 9B isoform X4

    RNA

    1. XR_010065344.1 RNA Sequence

    2. XR_010065345.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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