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    CRR6 chlororespiratory reduction 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819403, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRR6
    Official Full Name
    chlororespiratory reduction 6
    Primary source
    TAIR:AT2G47910
    Locus tag
    AT2G47910
    See related
    Araport:AT2G47910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    chlororespiratory reduction 6
    Summary
    Encodes a chloroplast thylakoid membrane protein. Required for the assembly/accumulation of the NAD(P)H dehydrogenase complex of the photosynthetic electron transport chain.
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    Genomic context

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    See CRR6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (19614564..19615769)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tubby like protein 3 Neighboring gene miscRNA Neighboring gene Kinase interacting (KIP1-like) family protein Neighboring gene uncharacterized protein Neighboring gene arabinogalactan protein 26

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chlororespiratory reduction 6 is a novel factor required for accumulation of the chloroplast NAD(P)H dehydrogenase complex in Arabidopsis. Munshi MK, et al. Plant Physiol, 2006 Jun. PMID 16648216, Free PMC Article
    2. Multistep assembly of chloroplast NADH dehydrogenase-like subcomplex A requires several nucleus-encoded proteins, including CRR41 and CRR42, in Arabidopsis. Peng L, et al. Plant Cell, 2012 Jan. PMID 22274627, Free PMC Article
    3. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Rutschow H, et al. Plant Physiol, 2008 Sep. PMID 18633119, Free PMC Article
    4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_130358.4
    NM_201984.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within NAD(P)H dehydrogenase complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    chlororespiratory reduction 6
    NP_566113.1
    • chlororespiratory reduction 6 (CRR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1817 (InterPro:IPR014946); Has 166 Blast hits to 166 proteins in 69 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
    NP_973713.1
    • chlororespiratory reduction 6 (CRR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1817 (InterPro:IPR014946); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19614564..19615769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201984.2 → NP_973713.1  chlororespiratory reduction 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973713.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q3EBE3
      Conserved Domains (1) summary
      pfam08847
      Location:37 → 193
      DUF1817; Domain of unknown function (DUF1817)

    2. NM_130358.4 → NP_566113.1  chlororespiratory reduction 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566113.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82258
      UniProtKB/TrEMBL
      A0A178W3L4, A0A5S9X869, A0A654F4A1
      Conserved Domains (1) summary
      pfam08847
      Location:85 → 241
      Crr6; Chlororespiratory reduction 6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82258.1

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