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    beta-hexosaminidase (DUF1336) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837957, updated on 18-Sep-2024

    Summary

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    Official Full Name
    beta-hexosaminidase (DUF1336)
    Primary source
    TAIR:AT1G13970
    Locus tag
    AT1G13970
    See related
    Araport:AT1G13970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16A14.19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (4779351..4782546, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene eukaryotic elongation factor 5A-1 Neighboring gene WRKY DNA-binding protein 4 Neighboring gene sec7 domain-containing protein Neighboring gene plant/protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101263.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    beta-hexosaminidase (DUF1336)
    NP_172850.2
    • Protein of unknown function (DUF1336); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT3G29180.2); Has 292 Blast hits to 292 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 248; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4779351..4782546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101263.5 → NP_172850.2  beta-hexosaminidase (DUF1336) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172850.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9UC30, A0A654EKE9, Q9XI89
      Conserved Domains (1) summary
      pfam07059
      Location:245 → 488
      DUF1336; Protein of unknown function (DUF1336)
    Nucleotide Protein
    Heading Accession and Version

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