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    transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839796, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcriptional regulator family protein
    Primary source
    TAIR:AT1G29220
    Locus tag
    AT1G29220
    See related
    Araport:AT1G29220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28N24.10; F28N24_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (10210520..10212722, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein Neighboring gene tRNA-Glu Neighboring gene O-fucosyltransferase family protein Neighboring gene miscRNA Neighboring gene CBL-interacting protein kinase 18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001198182.1
    NM_102662.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcriptional regulator family protein
    NP_001185111.1
    • transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479).
    NP_564324.1
    • transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479); Has 6494 Blast hits to 2810 proteins in 258 species: Archae - 2; Bacteria - 128; Metazoa - 3549; Fungi - 437; Plants - 298; Viruses - 183; Other Eukaryotes - 1897 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10210520..10212722 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102662.3 → NP_564324.1  transcriptional regulator family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564324.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1N2, A0A654EDW0, Q9LP50
      Conserved Domains (1) summary
      pfam07818
      Location:133 → 223
      HCNGP; HCNGP-like protein

    2. NM_001198182.1 → NP_001185111.1  transcriptional regulator family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185111.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1N2, F4HZY1
      Conserved Domains (1) summary
      pfam07818
      Location:133 → 230
      HCNGP; HCNGP-like protein
    Nucleotide Protein
    Heading Accession and Version

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