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    forkhead box protein, putative (DUF1644) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844114, updated on 18-Sep-2024

    Summary

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    Official Full Name
    forkhead box protein, putative (DUF1644)
    Primary source
    TAIR:AT1G77770
    Locus tag
    AT1G77770
    See related
    Araport:AT1G77770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32E8.10; T32E8_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (29246074..29248150, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nitrate reductase 1 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334793.1
    NM_106426.4
    NM_202434.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    forkhead box protein, putative (DUF1644)
    NP_177900.2
    • FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT4G08460.3); Has 291 Blast hits to 270 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_974163.1
    • FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT4G08460.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29246074..29248150 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106426.4 → NP_177900.2  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177900.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E6X8, Q84K51
      Conserved Domains (1) summary
      pfam07800
      Location:30 → 153
      DUF1644; Protein of unknown function (DUF1644)

    2. NM_202434.3 → NP_974163.1  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974163.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJR3, A0A384L361, A0A5S9WVC5, Q9CA17
      Conserved Domains (1) summary
      pfam07800
      Location:30 → 153
      DUF1644; Protein of unknown function (DUF1644)

    3. NM_001334793.1 → NP_001320636.1  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJR3, A0A384L361, A0A5S9WVC5, Q9CA17
      Conserved Domains (1) summary
      pfam07800
      Location:30 → 153
      DUF1644; Protein of unknown function (DUF1644)
    Nucleotide Protein
    Heading Accession and Version

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