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    MAP65-8 microtubule-associated protein 65-8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839685, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MAP65-8
    Official Full Name
    microtubule-associated protein 65-8
    Primary source
    TAIR:AT1G27920
    Locus tag
    AT1G27920
    See related
    Araport:AT1G27920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13K9.3; F13K9_3; microtubule-associated protein 65-8
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    Genomic context

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    See MAP65-8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (9726655..9729848)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA helicase family protein Neighboring gene plant U-box 45 Neighboring gene ncRNA Neighboring gene glucuronoxylan 4-O-methyltransferase-like protein (DUF579) Neighboring gene P-glycoprotein 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The C-terminal variable region specifies the dynamic properties of Arabidopsis microtubule-associated protein MAP65 isotypes. Smertenko AP, et al. Plant Cell, 2008 Dec. PMID 19060108, Free PMC Article
    2. Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins. Van Damme D, et al. Plant J, 2004 Nov. PMID 15469496
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001332791.1
    NM_102557.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in microtubule HDA PubMed 
    NOT located_in microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in phragmoplast HDA PubMed 
    located_in spindle HDA PubMed 

    General protein information

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    Preferred Names
    microtubule-associated protein 65-8
    NP_174113.2
    • microtubule-associated protein 65-8 (MAP65-8); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 2013 Blast hits to 1836 proteins in 335 species: Archae - 36; Bacteria - 203; Metazoa - 697; Fungi - 206; Plants - 352; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9726655..9729848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102557.3 → NP_174113.2  microtubule-associated protein 65-8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174113.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C7G0
      UniProtKB/TrEMBL
      A0A654EDG4
      Conserved Domains (1) summary
      pfam03999
      Location:56 → 558
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

    2. NM_001332791.1 → NP_001322317.1  microtubule-associated protein 65-8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATM1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C7G0.2

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