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    VMA10 vacuolar membrane ATPase 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821130, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VMA10
    Official Full Name
    vacuolar membrane ATPase 10
    Primary source
    TAIR:AT3G01390
    Locus tag
    AT3G01390
    See related
    Araport:AT3G01390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AVMA10; T13O15.3; T13O15_3; vacuolar membrane ATPase 10; VACUOLAR MEMBRANE ATPASE SUBUNIT G; VHA-G1
    Summary
    Subunit G of the vacuolar membrane ATPAse complex
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    Genomic context

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    See VMA10 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (149940..151572, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene CRM family member 2 Neighboring gene sulfatase and phosphatidylinositolglycan class N domain-containing protein Neighboring gene ARM repeat superfamily protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and expression of cDNAs encoding plant V-ATPase subunits in the corresponding yeast null mutants. Aviezer-Hagai K, et al. Biochim Biophys Acta, 2000 Aug 15. PMID 11004467
    2. SOS2 promotes salt tolerance in part by interacting with the vacuolar H+-ATPase and upregulating its transport activity. Batelli G, et al. Mol Cell Biol, 2007 Nov. PMID 17875927, Free PMC Article
    3. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
    4. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    5. Protein and metabolite composition of Arabidopsis stress granules. Kosmacz M, et al. New Phytol, 2019 May. PMID 30664249

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111005.6
    NM_180158.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables proton-transporting ATP synthase activity, rotational mechanism ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in cytoplasmic stress granule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plant-type vacuole ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    part_of proton-transporting two-sector ATPase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    part_of vacuolar proton-transporting V-type ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    vacuolar membrane ATPase 10
    NP_186788.1
    • vacuolar membrane ATPase 10 (VMA10); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: plasma membrane, proton-transporting two-sector ATPase complex, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit G2 (TAIR:AT4G23710.1); Has 617 Blast hits to 615 proteins in 206 species: Archae - 2; Bacteria - 17; Metazoa - 284; Fungi - 124; Plants - 126; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
    NP_850489.1
    • vacuolar membrane ATPase 10 (VMA10); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: plasma membrane, proton-transporting two-sector ATPase complex, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit G2 (TAIR:AT4G23710.1); Has 621 Blast hits to 619 proteins in 206 species: Archae - 2; Bacteria - 17; Metazoa - 288; Fungi - 124; Plants - 126; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      149940..151572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337334.1 → NP_001327894.1  vacuolar membrane ATPase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82628
      UniProtKB/TrEMBL
      A0A178VL96, A0A5S9X877
      Conserved Domains (1) summary
      pfam03179
      Location:5 → 109
      V-ATPase_G; Vacuolar (H+)-ATPase G subunit

    2. NM_001337333.1 → NP_001327895.1  vacuolar membrane ATPase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82628
      UniProtKB/TrEMBL
      A0A178VL96, A0A5S9X877
      Conserved Domains (1) summary
      pfam03179
      Location:5 → 109
      V-ATPase_G; Vacuolar (H+)-ATPase G subunit

    3. NM_111005.6 → NP_186788.1  vacuolar membrane ATPase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186788.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82628
      UniProtKB/TrEMBL
      A0A178VL96, A0A5S9X877
      Conserved Domains (1) summary
      pfam03179
      Location:5 → 109
      V-ATPase_G; Vacuolar (H+)-ATPase G subunit

    4. NM_180158.3 → NP_850489.1  vacuolar membrane ATPase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850489.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82628
      UniProtKB/TrEMBL
      A0A178VL96, A0A5S9X877
      Conserved Domains (1) summary
      pfam03179
      Location:5 → 109
      V-ATPase_G; Vacuolar (H+)-ATPase G subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82628.1

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