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    apoptosis inhibitor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821486, updated on 18-Sep-2024

    Summary

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    Official Full Name
    apoptosis inhibitor
    Primary source
    TAIR:AT3G19515
    Locus tag
    AT3G19515
    See related
    Araport:AT3G19515
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    14
    Sequence:
    Chromosome: 3; NC_003074.8 (6766621..6771169, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene complex 1 protein, LYR family protein Neighboring gene Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein Neighboring gene hypothetical protein (DUF626) Neighboring gene uncharacterized protein Neighboring gene glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084719.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    apoptosis inhibitor
    NP_001078188.1
    • CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast hits to 394 proteins in 84 species: Archae - 0; Bacteria - 3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6766621..6771169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084719.2 → NP_001078188.1  apoptosis inhibitor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078188.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FE23, F4JB86, Q680X1
      Conserved Domains (2) summary
      cd02619
      Location:424 → 647
      Peptidase_C1; C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some ...
      pfam05918
      Location:2 → 334
      API5; Apoptosis inhibitory protein 5 (API5)
    Nucleotide Protein
    Heading Accession and Version

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