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    Heavy metal transport/detoxification superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819650, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Heavy metal transport/detoxification superfamily protein
    Primary source
    TAIR:AT3G04900
    Locus tag
    AT3G04900
    See related
    Araport:AT3G04900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J14.15; T9J14_15
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (1349248..1349964, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene zeta-carotene desaturase Neighboring gene DNA-damage-repair/toleration protein (DRT102) Neighboring gene ncRNA Neighboring gene adenine phosphoribosyltransferase-like protein, putative (DUF2358) Neighboring gene Defensin-like (DEFL) family protein Neighboring gene with no lysine (K) kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Heavy metal transport/detoxification superfamily protein
    NP_187141.1
    • Heavy metal transport/detoxification superfamily protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.2); Has 240 Blast hits to 236 proteins in 32 species: Archae - 0; Bacteria - 3; Metazoa - 26; Fungi - 6; Plants - 201; Viruses - 1; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1349248..1349964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111362.2 → NP_187141.1  Heavy metal transport/detoxification superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187141.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CAV5
      UniProtKB/TrEMBL
      A0A5S9X947
      Conserved Domains (2) summary
      PHA03247
      Location:51 → 190
      PHA03247; large tegument protein UL36; Provisional
      cd00371
      Location:13 → 66
      HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAV5.1

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