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    LRR and NB-ARC domains-containing disease resistance protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820669, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LRR and NB-ARC domains-containing disease resistance protein
    Primary source
    TAIR:AT3G14460
    Locus tag
    AT3G14460
    See related
    Araport:AT3G14460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (4851990..4856450, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene CTC-interacting domain 9 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene NB-ARC domain-containing disease resistance protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An Arabidopsis thaliana leucine-rich repeat protein harbors an adenylyl cyclase catalytic center and affects responses to pathogens. Bianchet C, et al. J Plant Physiol, 2019 Jan. PMID 30530199
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables adenylate cyclase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LRR and NB-ARC domains-containing disease resistance protein
    NP_188064.1
    • LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G14470.1); Has 38623 Blast hits to 22788 proteins in 858 species: Archae - 54; Bacteria - 2838; Metazoa - 8237; Fungi - 658; Plants - 25379; Viruses - 2; Other Eukaryotes - 1455 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4851990..4856450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112306.2 → NP_188064.1  LRR and NB-ARC domains-containing disease resistance protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188064.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LRR5
      UniProtKB/TrEMBL
      A0A178V8Q1, A0A654F8T2
      Conserved Domains (6) summary
      PLN03210
      Location:1073 → 1411
      PLN03210; Resistant to P. syringae 6; Provisional
      COG4886
      Location:547 → 673
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:575 → 597
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:1093 → 1117
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam00931
      Location:177 → 413
      NB-ARC; NB-ARC domain
      pfam18052
      Location:36 → 93
      Rx_N; Rx N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LRR5.1

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