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    FYPP3 flower-specific, phytochrome-associated protein phosphatase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821536, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FYPP3
    Official Full Name
    flower-specific, phytochrome-associated protein phosphatase 3
    Primary source
    TAIR:AT3G19980
    Locus tag
    AT3G19980
    See related
    Araport:AT3G19980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''flower-specific; ATFYPP3; EMB2736; EMBRYO DEFECTIVE 2736; flower-specific; phytochrome-associated protein phosphatase 3; phytochrome-associated protein phosphatase 3''; SERINE/THREONINE PROTEIN PHOSPHATASE; STPP
    Summary
    Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.
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    Genomic context

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    See FYPP3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (6961736..6965206)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene myosin 1 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene E3 ubiquitin-protein ligase Neighboring gene translocase of the outer mitochondrial membrane 40

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Asparagine-Rich Protein NRP Facilitates the Degradation of the PP6-type Phosphatase FyPP3 to Promote ABA Response in Arabidopsis. Zhu T, et al. Mol Plant, 2018 Feb 5. PMID 29175650
    2. A phytochrome-associated protein phosphatase 2A modulates light signals in flowering time control in Arabidopsis. Kim DH, et al. Plant Cell, 2002 Dec. PMID 12468726, Free PMC Article
    3. The PP6 phosphatase regulates ABI5 phosphorylation and abscisic acid signaling in Arabidopsis. Dai M, et al. Plant Cell, 2013 Feb. PMID 23404889, Free PMC Article
    4. Arabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis. Yu X, et al. Proc Natl Acad Sci U S A, 2019 Oct 1. PMID 31527236, Free PMC Article
    5. TAP46 plays a positive role in the ABSCISIC ACID INSENSITIVE5-regulated gene expression in Arabidopsis. Hu R, et al. Plant Physiol, 2014 Feb. PMID 24357600, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. FyPP3 and FyPP1 proteins directly dephosphorylate ABI5 and regulate abscisic acid signaling.
      Title: The PP6 phosphatase regulates ABI5 phosphorylation and abscisic acid signaling in Arabidopsis.
    2. FYPP3 forms a PP6-type phosphatase holoenzyme, which directly regulates auxin efflux
      Title: A PP6-type phosphatase holoenzyme directly regulates PIN phosphorylation and auxin efflux in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112888.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein serine/threonine phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within negative regulation of flower development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein dephosphorylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 
    part_of protein phosphatase type 2A complex TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    flower-specific, phytochrome-associated protein phosphatase 3
    NP_188632.1
    • ''flower-specific, phytochrome-associated protein phosphatase 3'' (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6961736..6965206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112888.4 → NP_188632.1  flower-specific, phytochrome-associated protein phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188632.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LHE7
      UniProtKB/TrEMBL
      A0A178VAH8, A0A5S9XDU2
      Conserved Domains (1) summary
      cd07415
      Location:2 → 285
      MPP_PP2A_PP4_PP6; PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHE7.1

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