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    D-Tyr-tRNA(Tyr) deacylase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827578, updated on 18-Sep-2024

    Summary

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    Official Full Name
    D-Tyr-tRNA(Tyr) deacylase family protein
    Primary source
    TAIR:AT4G18460
    Locus tag
    AT4G18460
    See related
    Araport:AT4G18460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (10195537..10196799, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene L-Aspartase-like family protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene negative regulator of systemic acquired resistance (SNI1) Neighboring gene RNA helicase family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001341283.1
    NM_117960.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables D-aminoacyl-tRNA deacylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    D-Tyr-tRNA(Tyr) deacylase family protein
    NP_193582.2
    • D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10195537..10196799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117960.4 → NP_193582.2  D-Tyr-tRNA(Tyr) deacylase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193582.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FQP8, Q8VZ75
      Conserved Domains (1) summary
      PTZ00120
      Location:1 → 153
      PTZ00120; D-tyrosyl-tRNA(Tyr) deacylase; Provisional

    2. NM_001341283.1 → NP_001328214.1  D-Tyr-tRNA(Tyr) deacylase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3W2
    Nucleotide Protein
    Heading Accession and Version

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