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    proline-rich family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827660, updated on 18-Sep-2024

    Summary

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    Official Full Name
    proline-rich family protein
    Primary source
    TAIR:AT4G19200
    Locus tag
    AT4G19200
    See related
    Araport:AT4G19200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18B16.170; T18B16_170
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (10498748..10500809)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene zinc knuckle (CCHC-type) family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene RNAse l inhibitor protein 2 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Glycine- and Proline-Rich Protein AtGPRP3 Negatively Regulates Plant Growth in Arabidopsis. Liu X, et al. Int J Mol Sci, 2020 Aug 26. PMID 32859078, Free PMC Article
    2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_118040.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-rich family protein
    NP_193655.1
    • proline-rich family protein; Has 23677 Blast hits to 12773 proteins in 953 species: Archae - 9; Bacteria - 5550; Metazoa - 10820; Fungi - 2264; Plants - 2677; Viruses - 157; Other Eukaryotes - 2200 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10498748..10500809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118040.4 → NP_193655.1  proline-rich family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193655.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UTG1, Q9M0L8
    Nucleotide Protein
    Heading Accession and Version

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