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    Stigma-specific Stig1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828795, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Stigma-specific Stig1 family protein
    Primary source
    TAIR:AT4G26880
    Locus tag
    AT4G26880
    See related
    Araport:AT4G26880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10M23.220; F10M23_220
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (13508042..13508813, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Putative pyridoxal phosphate-dependent enzyme, YBL036C type Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene ncRNA Neighboring gene mitogen-activated protein kinase kinase kinase 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Stigma-specific Stig1 family protein
    NP_194418.1
    • Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT5G55110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13508042..13508813 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118822.2 → NP_194418.1  Stigma-specific Stig1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194418.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZ28
      UniProtKB/TrEMBL
      A0A178V306, A0A5S9XX27
      Conserved Domains (1) summary
      pfam04885
      Location:35 → 152
      Stig1; Stigma-specific protein, Stig1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZ28.1

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