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    rho GTPase-activating protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829450, updated on 18-Sep-2024

    Summary

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    Official Full Name
    rho GTPase-activating protein
    Primary source
    TAIR:AT4G33130
    Locus tag
    AT4G33130
    See related
    Araport:AT4G33130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I10.60; F4I10_60
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (15978989..15980813, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342198.1
    NM_119467.7
    NM_202945.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    rho GTPase-activating protein
    NP_001320120.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G16750.1); Has 162 Blast hits to 162 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_195039.6
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_974674.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15978989..15980813 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342199.1 → NP_001328066.1  rho GTPase-activating protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3I2, Q9SMZ6

    2. NM_001342198.1 → NP_001320120.1  rho GTPase-activating protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZ11, A8MS81

    3. NM_119467.7 → NP_195039.6  rho GTPase-activating protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195039.6

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4P2, A0A5S9XZ11, F4JVY3
      Conserved Domains (1) summary
      pfam14389
      Location:90 → 166
      Lzipper-MIP1; Leucine-zipper of ternary complex factor MIP1

    4. NM_202945.1 → NP_974674.1  rho GTPase-activating protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974674.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JVY5
      Conserved Domains (1) summary
      pfam14389
      Location:91 → 137
      Lzipper-MIP1; Leucine-zipper of ternary complex factor MIP1
    Nucleotide Protein
    Heading Accession and Version

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