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    actin binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 3770686, updated on 18-Sep-2024

    Summary

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    Official Full Name
    actin binding protein
    Primary source
    TAIR:AT5G07740
    Locus tag
    AT5G07740
    See related
    Araport:AT5G07740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBK20.20; MBK20_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    16
    Sequence:
    Chromosome: 5; NC_003076.8 (2458568..2467339, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Galactosyl transferase GMA12/MNN10 family protein Neighboring gene uncharacterized protein Neighboring gene formin homology 2 domain-containing protein / FH2 domain-containing protein Neighboring gene Actin-binding FH2 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342958.1
    NM_120856.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    actin binding protein
    NP_196391.2
    • actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2458568..2467339 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342957.1 → NP_001331227.1  actin binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD84, A0A5S9Y2B1

    2. NM_120856.4 → NP_196391.2  actin binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLQ7, Q9FLQ8
      UniProtKB/TrEMBL
      A0A5S9Y2B1, A0A654FZ96
      Conserved Domains (5) summary
      pfam03251
      Location:507 → 661
      Tymo_45kd_70kd; Tymovirus 45/70Kd protein
      pfam02181
      Location:1237 → 1610
      FH2; Formin Homology 2 Domain
      pfam10409
      Location:198 → 337
      PTEN_C2; C2 domain of PTEN tumor-suppressor protein
      NF000535
      Location:315 → 526
      MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
      cl28904
      Location:16 → 190
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    3. NM_001342958.1 → NP_001331228.1  actin binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD82, A0A5S9Y2B1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FLQ7.3

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