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    lipid transporter [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830656, updated on 18-Sep-2024

    Summary

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    Official Full Name
    lipid transporter
    Primary source
    TAIR:AT5G07630
    Locus tag
    AT5G07630
    See related
    Araport:AT5G07630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBK20.7; MBK20_7
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    17
    Sequence:
    Chromosome: 5; NC_003076.8 (2410703..2414750)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene Protein kinase superfamily protein Neighboring gene tRNA-Leu Neighboring gene RING/U-box superfamily protein Neighboring gene Actin-binding FH2 protein Neighboring gene structural maintenance of chromosomes 6A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342954.1
    NM_120845.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in dolichol-linked oligosaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    lipid transporter
    NP_196380.5
    • lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2410703..2414750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120845.5 → NP_196380.5  lipid transporter [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196380.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y337, F4K836
      Conserved Domains (2) summary
      COG2244
      Location:100 → 605
      RfbX; Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane/envelope biogenesis]
      cd13130
      Location:99 → 531
      MATE_rft1; Rft1-like subfamily of the multidrug and toxic compound extrusion family (MATE)

    2. NM_001342954.1 → NP_001332151.1  lipid transporter [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNU1, A0A1P8BG39
    Nucleotide Protein
    Heading Accession and Version

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