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    Cytochrome P450 superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830721, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cytochrome P450 superfamily protein
    Primary source
    TAIR:AT5G08250
    Locus tag
    AT5G08250
    See related
    Araport:AT5G08250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L15.12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (2653554..2655870, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tudor/PWWP/MBT domain protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene serine carboxypeptidase-like 35 Neighboring gene C5orf35 Neighboring gene hydroxymethylbilane synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120908.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Cytochrome P450 superfamily protein
    NP_196442.2
    • Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily B, polypeptide 1 (TAIR:AT5G23190.1); Has 27212 Blast hits to 27118 proteins in 1435 species: Archae - 44; Bacteria - 2429; Metazoa - 9998; Fungi - 5788; Plants - 7920; Viruses - 3; Other Eukaryotes - 1030 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2653554..2655870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342992.1 → NP_001330676.1  Cytochrome P450 superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKI9, A0A654FZE3, Q9LEY2
      Conserved Domains (1) summary
      cd11064
      Location:98 → 533
      CYP86A; cytochrome P450 family 86, subfamily A

    2. NM_120908.3 → NP_196442.2  Cytochrome P450 superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196442.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKI9, Q8L7B4
      Conserved Domains (1) summary
      PLN03195
      Location:4 → 479
      PLN03195; fatty acid omega-hydroxylase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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