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    MED19A mediator of RNA polymerase II transcription subunit 19a-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831097, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MED19A
    Official Full Name
    mediator of RNA polymerase II transcription subunit 19a-like protein
    Primary source
    TAIR:AT5G12230
    Locus tag
    AT5G12230
    See related
    Araport:AT5G12230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXC9.19; MXC9_19
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    Genomic context

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    See MED19A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (3953140..3956185, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pyrimidine 2 Neighboring gene RAB geranylgeranyl transferase beta subunit 1 Neighboring gene las1-like family protein Neighboring gene uncharacterized protein Neighboring gene CLAVATA3/ESR-RELATED 22

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nutrient status regulates MED19a phase separation for ORESARA1-dependent senescence. Cheng SLH, et al. New Phytol, 2022 Dec. PMID 36093737
    2. A downy mildew effector attenuates salicylic acid-triggered immunity in Arabidopsis by interacting with the host mediator complex. Caillaud MC, et al. PLoS Biol, 2013 Dec. PMID 24339748, Free PMC Article
    3. Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. Bäckström S, et al. Mol Cell, 2007 Jun 8. PMID 17560376
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Nutrient status regulates MED19a phase separation for ORESARA1-dependent senescence.
      Title: Nutrient status regulates MED19a phase separation for ORESARA1-dependent senescence.
    2. a positive regulator of immunity against Hyaloperonospora arabidopsidis
      Title: A downy mildew effector attenuates salicylic acid-triggered immunity in Arabidopsis by interacting with the host mediator complex.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121261.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mediator complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 19a-like protein
    NP_196784.1
    • MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3953140..3956185 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121261.3 → NP_196784.1  mediator of RNA polymerase II transcription subunit 19a-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196784.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NMK7, Q9FMP0
      UniProtKB/TrEMBL
      A0A178UR59, A0A5S9Y3I0, A0A7G2F6Z6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FMP0.1

    Gene LinkOut

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