olfcb1 olfactory receptor C family, b1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: olfcb1provided by ZNC
Official Full Name: olfactory receptor C family, b1provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2664
See related: Ensembl:ENSDARG00000007582 AllianceGenome:ZFIN:ZDB-GENE-030131-2664
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc14h06; olfcb1p; wu:fc14h06; si:ch1073-155h21.1
Summary: Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 20

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (98253..105375)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (109670..116697)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IBA Inferred from Biological aspect of Ancestor more info
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: olfactory receptor CB1

Names: olfactory receptor C family, b1, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001199968.3 → NP_001186897.2 olfactory receptor CB1 precursor

Status: VALIDATED

Source sequence(s)

CU993816, FP017161

UniProtKB/TrEMBL

A0A8M1NVM1, F1QPB6

Related

ENSDARP00000023804.8, ENSDART00000022725.9

Conserved Domains (4) summary

pfam00003
Location:579 → 804

7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR

pfam01094
Location:76 → 448

ANF_receptor; Receptor family ligand binding region

pfam07562
Location:486 → 534

NCD3G; Nine Cysteines Domain of family 3 GPCR

cl10011
Location:40 → 464

Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily