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    chic1 cysteine-rich hydrophobic domain 1 [ Danio rerio (zebrafish) ]

    Gene ID: 564524, updated on 4-Jan-2025

    Summary

    Official Symbol
    chic1provided by ZNC
    Official Full Name
    cysteine-rich hydrophobic domain 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7763
    See related
    Ensembl:ENSDARG00000053166 AllianceGenome:ZFIN:ZDB-GENE-030131-7763
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fj33g02
    Summary
    Predicted to be located in membrane. Orthologous to human CHIC1 (cysteine rich hydrophobic domain 1). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    NEW
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    Genomic context

    See chic1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (32951832..32959851, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (32611518..32619537, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene si:rp71-46j2.8 Neighboring gene solute carrier family 25 member 43 Neighboring gene ligand of numb-protein X 2b Neighboring gene caudal type homeobox 4 Neighboring gene kinase insert domain receptor like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    cysteine-rich hydrophobic domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001201463.1NP_001188392.1  cysteine-rich hydrophobic domain-containing protein 1

      See identical proteins and their annotated locations for NP_001188392.1

      Status: VALIDATED

      Source sequence(s)
      BX247946
      UniProtKB/TrEMBL
      A0A8M1P2G1, B0R125
      Related
      ENSDARP00000069642.4, ENSDART00000075157.5
      Conserved Domains (1) summary
      pfam10256
      Location:54142
      Erf4; Golgin subfamily A member 7/ERF4 family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      32951832..32959851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)