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    ccdc69 coiled-coil domain containing 69 [ Danio rerio (zebrafish) ]

    Gene ID: 794166, updated on 9-Dec-2024

    Summary

    Official Symbol
    ccdc69provided by ZNC
    Official Full Name
    coiled-coil domain containing 69provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-120720-3
    See related
    Ensembl:ENSDARG00000111091 AllianceGenome:ZFIN:ZDB-GENE-120720-3
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable microtubule binding activity. Predicted to be involved in spindle midzone assembly. Predicted to be located in spindle midzone. Predicted to be active in nucleus. Predicted to colocalize with cytoplasm. Orthologous to human CCDC69 (coiled-coil domain containing 69). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ccdc69 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (26247690..26268180)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (25943146..25970075)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100534777 Neighboring gene uncharacterized LOC137487590 Neighboring gene uncharacterized LOC137487523 Neighboring gene uncharacterized LOC137487524

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in spindle midzone assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    colocalizes_with cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in midbody IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in spindle midzone ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 69

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423999.1NP_001410928.1  coiled-coil domain-containing protein 69

      Status: VALIDATED

      Source sequence(s)
      FO082779, LO018208
      UniProtKB/Swiss-Prot
      A7MC22
      UniProtKB/TrEMBL
      A0A2R8QE83, A0A8M9PZM8
      Related
      ENSDARP00000152039.1, ENSDART00000192793.1

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      26247690..26268180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)