tent5ba terminal nucleotidyltransferase 5ba [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tent5baprovided by ZNC
Official Full Name: terminal nucleotidyltransferase 5baprovided by ZNC
Primary source: ZFIN:ZDB-GENE-061110-129
See related: Ensembl:ENSDARG00000039943 AllianceGenome:ZFIN:ZDB-GENE-061110-129
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb982; fam46a; fam46b; fam46ba; fc02e08; wu:fc02e08; zgc:153970
Summary: Predicted to enable poly(A) RNA polymerase activity. Predicted to be involved in mRNA stabilization. Predicted to be located in cytoplasm and nucleus. Is expressed in several structures, including ectoderm; epidermis; hatching gland; polster; and yolk syncytial layer. Orthologous to human TENT5B (terminal nucleotidyltransferase 5B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 16

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	16	NC_007127.7 (34046749..34056443)
105	previous assembly	GRCz10 (GCF_000002035.5)	16	NC_007127.6 (34092719..34102413)

Chromosome 16 - NC_007127.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

fc02e08.x1 (e-PCR)
- UniSTS:203674

fc31a08.x1 (e-PCR)
- UniSTS:193508

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables poly(A) RNA polymerase activity	IBA Inferred from Biological aspect of Ancestor more info
enables poly(A) RNA polymerase activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mRNA stabilization	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: terminal nucleotidyltransferase 5ba

Names: family with sequence similarity 46, member A; family with sequence similarity 46, member B; family with sequence similarity 46, member Ba

NP_001071274.1

EC 2.7.7.19

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.