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    ehbp1 EH domain binding protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 560857, updated on 9-Dec-2024

    Summary

    Official Symbol
    ehbp1provided by ZNC
    Official Full Name
    EH domain binding protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091006-4
    See related
    Ensembl:ENSDARG00000043643 AllianceGenome:ZFIN:ZDB-GENE-091006-4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc92e03; wu:fc92e03; si:ch211-63b16.5
    Summary
    Is expressed in telencephalon. Orthologous to human EHBP1 (EH domain binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ehbp1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (24109185..24315315)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (24090699..24296914)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:ch211-63b16.4 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b Neighboring gene uncharacterized LOC137488098 Neighboring gene uncharacterized LOC108179765 Neighboring gene orthodenticle homeobox 1 Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene malate dehydrogenase 1Ab, NAD (soluble)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    EH domain-binding protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      24109185..24315315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005158531.5XP_005158588.1  EH domain-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8M2B4X7
      Conserved Domains (3) summary
      pfam00307
      Location:469563
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:11131239
      DUF3585; Protein of unknown function (DUF3585)
    2. XM_001919697.8XP_001919732.2  EH domain-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8M1QH99
      Conserved Domains (3) summary
      pfam00307
      Location:469563
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:11121238
      DUF3585; Protein of unknown function (DUF3585)
    3. XM_005158533.5XP_005158590.1  EH domain-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8M2B5E5
      Conserved Domains (3) summary
      pfam00307
      Location:469563
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:10531179
      DUF3585; Protein of unknown function (DUF3585)
    4. XM_068214587.1XP_068070688.1  EH domain-binding protein 1 isoform X5

      Related
      ENSDARP00000153366.1, ENSDART00000180123.1
    5. XM_005158532.5XP_005158589.1  EH domain-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8M2B5F3, A0A8M9PLE5
      Conserved Domains (3) summary
      pfam00307
      Location:438532
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:10821208
      DUF3585; Protein of unknown function (DUF3585)
    6. XM_009293058.4XP_009291333.1  EH domain-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8M3ARD1, A0A8M9PLE5, X1WCN4
      Related
      ENSDARP00000127979.1, ENSDART00000156251.3
      Conserved Domains (3) summary
      pfam00307
      Location:438532
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:10221148
      DUF3585; Protein of unknown function (DUF3585)