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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_131736.3 → NP_571811.3 slit homolog 3 protein precursor
Status: VALIDATED
- Source sequence(s)
-
AL928691, BX323583
- UniProtKB/TrEMBL
- A0A8M1PC10, A0A8M3ARY3, F1RCV3
- Related
- ENSDARP00000112770.1, ENSDART00000146299.3
- Conserved Domains (12) summary
-
- smart00369
Location:815 → 838
- LRR_TYP; Leucine-rich repeats, typical (most populated) subfamily
- smart00013
Location:718 → 749
- LRRNT; Leucine rich repeat N-terminal domain
- smart00082
Location:850 → 899
- LRRCT; Leucine rich repeat C-terminal domain
- cd00054
Location:1067 → 1103
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00116
Location:78 → 211
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00031
Location:727 → 746
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:55 → 77
- LRR_RI; leucine-rich repeat [structural motif]
- pfam02210
Location:1182 → 1305
- Laminin_G_2; Laminin G domain
- pfam12799
Location:323 → 363
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:768 → 828
- LRR_8; Leucine rich repeat
- cl15307
Location:206 → 255
- TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
- cl21545
Location:1457 → 1512
- GHB_like; Glycoprotein hormone beta chain homologues
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007125.7 Reference GRCz11 Primary Assembly
- Range
-
24491818..24761133 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394909.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
442561..695332 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_2
Genomic
-
NW_018395315.1 Reference GRCz11 ALT_DRER_TU_2
- Range
-
128941..148925 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)