U-box domain-containing protein kinase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Go to the top of the page Help

Official Full Name: U-box domain-containing protein kinase family protein
Primary source: TAIR:AT2G19410
Locus tag: AT2G19410
See related: Araport:AT2G19410
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F27F23.21; F27F23_21
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 10

Sequence:: Chromosome: 2; NC_003071.7 (8404764..8409081, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Orthologs from OrthoDB

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables ubiquitin-protein transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein ubiquitination	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

Go to the top of the page Help

Preferred Names: U-box domain-containing protein kinase family protein

NP_179531.1

U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G57035.1); Has 118675 Blast hits to 117387 proteins in 4577 species: Archae - 133; Bacteria - 13900; Metazoa - 43121; Fungi - 9955; Plants - 33830; Viruses - 360; Other Eukaryotes - 17376 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

8404764..8409081 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_127499.2 → NP_179531.1 U-box domain-containing protein kinase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_179531.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8S8S7

UniProtKB/TrEMBL

A0A654EVS1

Conserved Domains (4) summary

smart00504
Location:728 → 790

Ubox; Modified RING finger domain

smart00219
Location:445 → 695

TyrKc; Tyrosine kinase, catalytic domain

cl00292
Location:24 → 164

AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.

cl21453
Location:448 → 708

PKc_like; Protein Kinases, catalytic domain
NM_001335634.1 → NP_001323703.1 U-box domain-containing protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VSL7, A0A1P8AY00
NM_001335635.1 → NP_001323704.1 U-box domain-containing protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8AXV0, A0A5S9WZJ3, A0A654EVS1

Conserved Domains (3) summary

smart00504
Location:714 → 776

Ubox; Modified RING finger domain

cd01989
Location:24 → 150

STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...

cl21453
Location:434 → 694

PKc_like; Protein Kinases, catalytic domain