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    CSLA07 cellulose synthase like [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818134, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CSLA07
    Official Full Name
    cellulose synthase like
    Primary source
    TAIR:AT2G35650
    Locus tag
    AT2G35650
    See related
    Araport:AT2G35650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLA07; ATCSLA7; cellulose synthase like; CELLULOSE SYNTHASE LIKE A7; CSLA7; T20F21.16; T20F21_16
    Summary
    a member of Glycosyltransferase- Family 2 and encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. Mutants exhibit defects in pollen tube growth and embryo development. The defective embryonic development was associated with reduced proliferation and failed cellularization of the endosperm.
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    Genomic context

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    See CSLA07 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (14985470..14988362)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ubiquitin 7 Neighboring gene ncRNA Neighboring gene Homeodomain-like superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtCSLA7, a cellulose synthase-like putative glycosyltransferase, is important for pollen tube growth and embryogenesis in Arabidopsis. Goubet F, et al. Plant Physiol, 2003 Feb. PMID 12586879, Free PMC Article
    2. Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. Liepman AH, et al. Proc Natl Acad Sci U S A, 2005 Feb 8. PMID 15647349, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001336568.1
    NM_001336569.1
    NM_001336570.1
    NM_129120.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucomannan 4-beta-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables mannan synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase like
    NP_565813.1
    • cellulose synthase like (CSLA07); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5575 Blast hits to 5571 proteins in 1570 species: Archae - 229; Bacteria - 4378; Metazoa - 38; Fungi - 87; Plants - 496; Viruses - 11; Other Eukaryotes - 336 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14985470..14988362
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129120.4 → NP_565813.1  cellulose synthase like [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565813.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFW7, Q93YX2, Q9ZQN8
      UniProtKB/TrEMBL
      A0A654F0L0, W8PUY9
      Conserved Domains (1) summary
      cd06437
      Location:119 → 355
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

    2. NM_001336568.1 → NP_001325223.1  cellulose synthase like [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXN7, A0A1P8B2I0, A0A384L370, A0A654F0L0
      Conserved Domains (1) summary
      cd06437
      Location:47 → 283
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

    3. NM_001336569.1 → NP_001325221.1  cellulose synthase like [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2I3

    4. NM_001336570.1 → NP_001325222.1  cellulose synthase like [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXN7, A0A1P8B2I0, A0A384L370, A0A654F0L0
      Conserved Domains (1) summary
      cd06437
      Location:47 → 283
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQN8.2

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