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    GUT15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816358, updated on 11-Sep-2024

    Summary

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    Official Symbol
    GUT15
    Primary source
    TAIR:AT2G18440
    Locus tag
    AT2G18440
    See related
    Araport:AT2G18440
    Gene type
    ncRNA
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GENE WITH UNSTABLE TRANSCRIPT 15; T30D6.5; T30D6_5
    Summary
    Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.
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    Genomic context

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    See GUT15 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (7994941..7997239, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene elongator complex protein Neighboring gene Gibberellin-regulated family protein Neighboring gene pseudo Neighboring gene succinate dehydrogenase 1-2 Neighboring gene uncharacterized protein Neighboring gene Chaperone DnaJ-domain superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A stable tRNA-like molecule is generated from the long noncoding RNA GUT15 in Arabidopsis. Plewka P, et al. RNA Biol, 2018. PMID 29561243, Free PMC Article
    2. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7994941..7997239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_143752.1 RNA Sequence

      Status: REVIEWED

    2. NR_143753.1 RNA Sequence

      Status: REVIEWED

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