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    UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841673, updated on 18-Sep-2024

    Summary

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    Official Full Name
    UDP-Glycosyltransferase superfamily protein
    Primary source
    TAIR:AT1G52420
    Locus tag
    AT1G52420
    See related
    Araport:AT1G52420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19K6.13
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (19527822..19531443)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TSK-associating protein 1 Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article
    2. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_104120.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi cis cisterna HDA PubMed 

    General protein information

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    Preferred Names
    UDP-Glycosyltransferase superfamily protein
    NP_175651.1
    • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G15940.2); Has 7088 Blast hits to 7079 proteins in 1470 species: Archae - 243; Bacteria - 4881; Metazoa - 13; Fungi - 38; Plants - 140; Viruses - 0; Other Eukaryotes - 1773 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19527822..19531443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104120.4 → NP_175651.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175651.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WL63, A0A654EJ83, A0A7G2E3E8, Q9SSP6
      Conserved Domains (2) summary
      cd03801
      Location:235 → 664
      GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase
      pfam16994
      Location:232 → 402
      Glyco_trans_4_5; Glycosyl-transferase family 4
    Nucleotide Protein
    Heading Accession and Version

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