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    SART-1 family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820698, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SART-1 family
    Primary source
    TAIR:AT3G14700
    Locus tag
    AT3G14700
    See related
    Araport:AT3G14700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (4940318..4941398)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 14 Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 15 Neighboring gene RNI-like superfamily protein Neighboring gene MAP kinase 19

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338133.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SART-1 family
    NP_001319553.1
    • SART-1 family; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT5G16780.1); Has 296 Blast hits to 296 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 96; Plants - 41; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4940318..4941398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112331.2 → NP_188088.1  SART-1 family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188088.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VB43, A0A654F893, Q84VW3
      Conserved Domains (1) summary
      pfam03343
      Location:35 → 162
      SART-1; SART-1 family

    2. NM_001338133.1 → NP_001319553.1  SART-1 family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VB43, A0A654F893, Q84VW3
      Conserved Domains (1) summary
      pfam03343
      Location:35 → 162
      SART-1; SART-1 family
    Nucleotide Protein
    Heading Accession and Version

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