B120 S-locus lectin protein kinase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: B120
Official Full Name: S-locus lectin protein kinase family protein
Primary source: TAIR:AT4G21390
Locus tag: AT4G21390
See related: Araport:AT4G21390
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T6K22.120; T6K22_120
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Genomic context

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See B120 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 6

Sequence:: Chromosome: 4; NC_003075.7 (11394295..11397726, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001341479.1

Supported by ESTs:

NM_118259.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables calmodulin binding	ISS Inferred from Sequence or Structural Similarity more info
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in recognition of pollen	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: S-locus lectin protein kinase family protein

NP_193870.1

B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

11394295..11397726 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_118259.4 → NP_193870.1 S-locus lectin protein kinase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_193870.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O81906, Q0WPA4, Q9SVK2

UniProtKB/TrEMBL

A0A178USE7, A0A5S9XUU8, A0A654FRE3

Conserved Domains (4) summary

cd01098
Location:342 → 427

PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...

cd14066
Location:535 → 800

STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

pfam00954
Location:215 → 330

S_locus_glycop; S-locus glycoprotein domain

pfam01453
Location:78 → 182

B_lectin; D-mannose binding lectin
NM_001341479.1 → NP_001328774.1 S-locus lectin protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B5P5, A0A654FRE3