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    rps15ae ribosomal protein S15A E [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829064, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rps15ae
    Official Full Name
    ribosomal protein S15A E
    Primary source
    TAIR:AT4G29430
    Locus tag
    AT4G29430
    See related
    Araport:AT4G29430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A13.250; F17A13_250; ribosomal protein S15A E
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    Genomic context

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    See rps15ae in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (14472303..14473621)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene F-box/RNI-like superfamily protein Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene Leucine-rich repeat protein kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts. Adams KL, et al. Plant Cell, 2002 Apr. PMID 11971146, Free PMC Article
    2. Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Chang IF, et al. Plant Physiol, 2005 Mar. PMID 15734919, Free PMC Article
    3. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
    4. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    5. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119088.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosolic ribosome HDA PubMed 
    part_of cytosolic small ribosomal subunit HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    ribosomal protein S15A E
    NP_194672.1
    • ribosomal protein S15A E (rps15ae); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, cytosolic small ribosomal subunit, cytosolic ribosome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A B (TAIR:AT2G19720.1); Has 3554 Blast hits to 3554 proteins in 1296 species: Archae - 277; Bacteria - 1753; Metazoa - 425; Fungi - 219; Plants - 281; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14472303..14473621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119088.4 → NP_194672.1  ribosomal protein S15A E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194672.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M0E0
      UniProtKB/TrEMBL
      A0A178V1W4, A0A5S9XX05
      Conserved Domains (1) summary
      PLN00146
      Location:1 → 129
      PLN00146; 40S ribosomal protein S15a; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M0E0.1

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