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    fanconi anemia group E protein FANCE protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829077, updated on 18-Sep-2024

    Summary

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    Official Full Name
    fanconi anemia group E protein FANCE protein
    Primary source
    TAIR:AT4G29560
    Locus tag
    AT4G29560
    See related
    Araport:AT4G29560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16L4.70; T16L4_70
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (14503873..14506015, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene hypothetical protein (DUF626) Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The FANCC-FANCE-FANCF complex is evolutionarily conserved and regulates meiotic recombination. Singh DK, et al. Nucleic Acids Res, 2023 Apr 11. PMID 36652992, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119101.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in meiotic DNA double-strand break processing involved in reciprocal meiotic recombination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Fanconi anaemia nuclear complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    fanconi anemia group E protein FANCE protein
    NP_194685.1
    • CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits to 41 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14503873..14506015 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119101.4 → NP_194685.1  fanconi anemia group E protein FANCE protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194685.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178USJ3, A0A5S9XXR8, Q9SU89
      Conserved Domains (1) summary
      cd07439
      Location:239 → 492
      FANCE_c-term; Fanconi anemia complementation group E protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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