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    TLD-domain containing nucleolar protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830146, updated on 18-Sep-2024

    Summary

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    Official Full Name
    TLD-domain containing nucleolar protein
    Primary source
    TAIR:AT4G39870
    Locus tag
    AT4G39870
    See related
    Araport:AT4G39870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J17.40; T5J17_40
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (18501877..18504487)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene hematological/neurological-like protein Neighboring gene ncRNA Neighboring gene tRNA-Arg Neighboring gene Ribosomal protein L23/L15e family protein Neighboring gene RAB GTPase homolog H1C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001204045.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    TLD-domain containing nucleolar protein
    NP_001190974.1
    • TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT2G05590.2).
    NP_195697.3
    • TLD-domain containing nucleolar protein; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT2G05590.2); Has 2250 Blast hits to 2105 proteins in 277 species: Archae - 0; Bacteria - 56; Metazoa - 1073; Fungi - 317; Plants - 190; Viruses - 32; Other Eukaryotes - 582 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18501877..18504487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120150.6 → NP_195697.3  TLD-domain containing nucleolar protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195697.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5T7, A0A5S9Y069, Q8GUN9
      Conserved Domains (1) summary
      pfam07534
      Location:236 → 370
      TLD; TLD

    2. NM_001204045.1 → NP_001190974.1  TLD-domain containing nucleolar protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190974.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5T7, A0A5S9Y069, Q8GUN9
      Conserved Domains (1) summary
      pfam07534
      Location:236 → 370
      TLD; TLD
    Nucleotide Protein
    Heading Accession and Version

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