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    PEBP (phosphatidylethanolamine-binding protein) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830983, updated on 18-Sep-2024

    Summary

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    Official Full Name
    PEBP (phosphatidylethanolamine-binding protein) family protein
    Primary source
    TAIR:AT5G01300
    Locus tag
    AT5G01300
    See related
    Araport:AT5G01300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T10O8.10; T10O8_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (121483..122525, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene carboxyl-terminal domain (ctd) phosphatase-like 2 Neighboring gene GPI-anchored protein Neighboring gene mRNA capping enzyme family protein Neighboring gene transcription factor bHLH140-like protein Neighboring gene APRATAXIN-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001125675.1
    NM_001342583.1
    NM_120208.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PEBP (phosphatidylethanolamine-binding protein) family protein
    NP_001119147.1
    • PEBP (phosphatidylethanolamine-binding protein) family protein; FUNCTIONS IN: phosphatidylethanolamine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: YbhB/YbcL (InterPro:IPR005247), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_195750.1
    • PEBP (phosphatidylethanolamine-binding protein) family protein; FUNCTIONS IN: phosphatidylethanolamine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: YbhB/YbcL (InterPro:IPR005247), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      121483..122525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120208.4 → NP_195750.1  PEBP (phosphatidylethanolamine-binding protein) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195750.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UI92, Q9M042
      Conserved Domains (1) summary
      cd00865
      Location:7 → 159
      PEBP_bact_arch; PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

    2. NM_001125675.1 → NP_001119147.1  PEBP (phosphatidylethanolamine-binding protein) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119147.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F4A2, B3H785
      Conserved Domains (1) summary
      cd00865
      Location:8 → 125
      PEBP_bact_arch; PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

    3. NM_001342583.1 → NP_001331182.1  PEBP (phosphatidylethanolamine-binding protein) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD35
    Nucleotide Protein
    Heading Accession and Version

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