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    Interleukin-1 receptor-associated kinase 4 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831007, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Interleukin-1 receptor-associated kinase 4 protein
    Primary source
    TAIR:AT5G11360
    Locus tag
    AT5G11360
    See related
    Araport:AT5G11360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2I11.250; F2I11_250
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (3625570..3626735, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene DNAse I-like superfamily protein Neighboring gene FBD / Leucine Rich Repeat domains containing protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate synthase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001085100.1
    NM_001161236.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Interleukin-1 receptor-associated kinase 4 protein
    NP_001078569.1
    • Interleukin-1 receptor-associated kinase 4 protein; CONTAINS InterPro DOMAIN/s: Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11400.2); Has 983 Blast hits to 853 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 983; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_001154708.1
    • Interleukin-1 receptor-associated kinase 4 protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11400.2); Has 3076 Blast hits to 2913 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3076; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_196697.2
    • Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11400.2); Has 3084 Blast hits to 2897 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3084; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3625570..3626735 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121174.4 → NP_196697.2  Interleukin-1 receptor-associated kinase 4 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196697.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKQ9, F4JWH8, Q9LFM1
      Conserved Domains (1) summary
      cl21453
      Location:104 → 189
      PKc_like; Protein Kinases, catalytic domain

    2. NM_001085100.1 → NP_001078569.1  Interleukin-1 receptor-associated kinase 4 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078569.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQZ9, Q9LFM1
      Conserved Domains (1) summary
      cl21453
      Location:109 → 180
      PKc_like; Protein Kinases, catalytic domain

    3. NM_001161236.2 → NP_001154708.1  Interleukin-1 receptor-associated kinase 4 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154708.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FDW9, A6QRB5, Q9LFM1
      Conserved Domains (1) summary
      cl21453
      Location:103 → 188
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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