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    Endosomal targeting BRO1-like domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831250, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Endosomal targeting BRO1-like domain-containing protein
    Primary source
    TAIR:AT5G14020
    Locus tag
    AT5G14020
    See related
    Araport:AT5G14020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAC12.31; MAC12_31
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (4523421..4526167, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene translocon-associated protein beta (TRAPB) family protein Neighboring gene tRNA-Lys

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A plant Bro1 domain protein BRAF regulates multivesicular body biogenesis and membrane protein homeostasis. Shen J, et al. Nat Commun, 2018 Sep 17. PMID 30224707, Free PMC Article
    2. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343306.1
    NM_001343307.1
    NM_001343308.1
    NM_001343309.1
    NM_001343310.1
    NM_001343311.1
    NM_121405.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Endosomal targeting BRO1-like domain-containing protein
    NP_001318557.1
    • Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4523421..4526167 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343306.1 → NP_001318557.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT25, A0A5S9Y4S9, Q0WSL5

    2. NM_001343309.1 → NP_001332561.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT25, A0A5S9Y4S9, Q0WSL5

    3. NM_121405.4 → NP_196906.3  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196906.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT25, A0A5S9Y4S9, Q0WSL5
      Conserved Domains (1) summary
      cd09034
      Location:10 → 388
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    4. NM_001343308.1 → NP_001332562.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT25, A0A1P8BHC4

    5. NM_001343307.1 → NP_001332563.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BHD4

    6. NM_001343311.1 → NP_001332559.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UT25, A0A1P8BHC4

    7. NM_001343310.1 → NP_001332560.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BHD4
    Nucleotide Protein
    Heading Accession and Version

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