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    ABCI11 non-intrinsic ABC protein 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831259, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCI11
    Official Full Name
    non-intrinsic ABC protein 14
    Primary source
    TAIR:AT5G14100
    Locus tag
    AT5G14100
    See related
    Araport:AT5G14100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14; ATNAP14; ATP-binding cassette I11; MUA22.10; MUA22_10; NAP14; non-intrinsic ABC protein 14
    Summary
    member of NAP subfamily
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    Genomic context

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    See ABCI11 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (4549438..4551843, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Thioredoxin superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene regulator of nonsense transcript protein Neighboring gene uncharacterized protein Neighboring gene peroxidase (DUF 3339)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Disruption of Nap14, a plastid-localized non-intrinsic ABC protein in Arabidopsis thaliana results in the over-accumulation of transition metals and in aberrant chloroplast structures. Shimoni-Shor E, et al. Plant Cell Environ, 2010 Jun. PMID 20132520
    2. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. Voith von Voithenberg L, et al. Front Plant Sci, 2019. PMID 31736987, Free PMC Article
    3. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtNAP14 plays an important role in plastid transition metal homeostasis. [Nap14]
      Title: Disruption of Nap14, a plastid-localized non-intrinsic ABC protein in Arabidopsis thaliana results in the over-accumulation of transition metals and in aberrant chloroplast structures.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_121413.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within multicellular organismal-level iron ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast inner membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 14
    NP_196914.1
    • non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4549438..4551843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121413.2 → NP_196914.1  non-intrinsic ABC protein 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196914.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LEF6, Q9FMU0
      UniProtKB/TrEMBL
      A0A178UMS8, A0A178UPT9, A0A5S9Y3Y4
      Conserved Domains (1) summary
      cd03225
      Location:52 → 268
      ABC_cobalt_CbiO_domain1; First domain of the ATP-binding cassette component of cobalt transport system
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEF6.1

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