U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CSLA02 cellulose synthase-like A02 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832337, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CSLA02
    Official Full Name
    cellulose synthase-like A02
    Primary source
    TAIR:AT5G22740
    Locus tag
    AT5G22740
    See related
    Araport:AT5G22740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A02; ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A2; ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A02; ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A2; ATCSLA02; ATCSLA2; CELLULOSE SYNTHASE-LIKE A 2; cellulose synthase-like A02; CSLA2; MDJ22.16; MDJ22_16
    Summary
    encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CSLA02 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (7554689..7560190, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box/FBD/LRR protein Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene DNA/RNA helicase protein Neighboring gene PHD finger family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. CELLULOSE SYNTHASE-LIKE A2, a glucomannan synthase, is involved in maintaining adherent mucilage structure in Arabidopsis seed. Yu L, et al. Plant Physiol, 2014 Apr. PMID 24569843, Free PMC Article
    2. The Patterned Structure of Galactoglucomannan Suggests It May Bind to Cellulose in Seed Mucilage. Yu L, et al. Plant Physiol, 2018 Nov. PMID 30185440, Free PMC Article
    3. Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. Liepman AH, et al. Proc Natl Acad Sci U S A, 2005 Feb 8. PMID 15647349, Free PMC Article
    4. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
    5. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CSLA2 is responsible for the synthesis of this patterned glucomannan backbone and MAGT1 catalyses the addition of alpha-Gal.
      Title: The Patterned Structure of Galactoglucomannan Suggests It May Bind to Cellulose in Seed Mucilage.
    2. Glucomannans synthesized by CSLA2 are involved in modulating the structure of adherent mucilage.[CSLA2]
      Title: CELLULOSE SYNTHASE-LIKE A2, a glucomannan synthase, is involved in maintaining adherent mucilage structure in Arabidopsis seed.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help
    NM_122180.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucomannan 4-beta-mannosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glucomannan 4-beta-mannosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables mannan synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mucilage biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mucilage metabolic process involved in seed coat development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in Golgi medial cisterna HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cellulose synthase-like A02
    NP_197666.1
    • cellulose synthase-like A02 (CSLA02); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5133 Blast hits to 5129 proteins in 1484 species: Archae - 200; Bacteria - 4017; Metazoa - 35; Fungi - 91; Plants - 482; Viruses - 11; Other Eukaryotes - 297 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7554689..7560190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122180.3 → NP_197666.1  cellulose synthase-like A02 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197666.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FNI7
      UniProtKB/TrEMBL
      A0A178UR14, A0A5S9Y6T6, A0A654G3G8, W8PUD8
      Conserved Domains (1) summary
      cd06437
      Location:97 → 333
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FNI7.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools