Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Leucine-rich repeat protein kinase family protein
Primary source: TAIR:AT5G37450
Locus tag: AT5G37450
See related: Araport:AT5G37450
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T25O11.15; T25O11_15
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 19

Sequence:: Chromosome: 5; NC_003076.8 (14852606..14857166, complement)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables kinase activity	ISS Inferred from Sequence or Structural Similarity more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within phosphorylation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in plasma membrane	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Leucine-rich repeat protein kinase family protein

NP_198561.1

Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

14852606..14857166 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001344198.1 → NP_001332713.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

C0LGU1, F4K767, Q9FG43

UniProtKB/TrEMBL

A0A654G5R7

Conserved Domains (3) summary

PLN00113
Location:61 → 901

PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

cd14066
Location:637 → 902

STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

sd00033
Location:103 → 126

LRR_RI; leucine-rich repeat [structural motif]
NM_001344197.1 → NP_001332712.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1R7T3G3, A0A654G5R7
NM_001344199.1 → NP_001332711.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1R7T3G2
NM_123104.1 → NP_198561.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_198561.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654G5R7

Conserved Domains (5) summary

smart00221
Location:610 → 875

STYKc; Protein kinase; unclassified specificity

COG4886
Location:78 → 283

LRR; Leucine-rich repeat (LRR) protein [Transcription]

cd00116
Location:70 → 309

LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

cd14066
Location:613 → 878

STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

sd00033
Location:79 → 102

LRR_RI; leucine-rich repeat [structural motif]